diff --git a/OVERSEER-STATUS.md b/OVERSEER-STATUS.md index 6e1b1da..ce5bea6 100644 --- a/OVERSEER-STATUS.md +++ b/OVERSEER-STATUS.md @@ -98,3 +98,7 @@ RQ2 RATIFIED (operator Andre, 2026-07-20, while blind) — observation-consisten - HOLDING — awaiting operator freeze/GO. Both build tracks complete; both confirmatory tracks blocked on HUMAN gates: RQ2-P3 battery → §10 freeze SHA-256; RQ3 battery + live added-latency → operator-GO + live isolated-docker grid. Standing down: no new stones, no speculative results, no confirmatory work until the operator delivers freeze/GO. - 2026-07-21 OVERSEER COMMAND (operator-authorized: Andre delegated per-gate command authority 2026-07-21, "make a command decision for each and proceed"). THREE command decisions recorded: **D1** — RQ2-P3 prereg → FREEZE NOW + run confirmatory battery. **D2** — RQ3 companion → GO on live confirmatory battery, grid permitting. **D3** — paper structure → ONE COMBINED companion paper (RQ2-P3 mechanism-correction is the LEAD section — the frozen-detector method caught the lead RQ2-P1 "shrink" as a unique-bridge artifact; RQ3 churn-resilience is the second half; Holm-7 over the full family is authoritative, supersedes the lead's partial embedding). NOT split into two papers. - STEP 1 DONE — RQ2-P3 prereg FROZEN. §10 filled (FROZEN 2026-07-21; APPROVED BY Andre delegated, executed by overseer; POOL/SKEW LOCKED B∈{2,4,8}, alpha∈{0,1.0,2.0}); no hypothesis/param changed (design LOCKED, §7 re-word already at 7ab3466 — froze AS-IS). SHA convention mirrors the lead (full-file sha256sum in a sidecar, not embedded inline → no self-referential fixpoint). **RQ2-P3 PREREG SHA-256: `8db4e8a7ac60f8b2861f2387249db68a3fd44822f6b3d9c7c6990ff65f261a3b`** (sidecar `docs/rq2p3-mechanism-prereg.sha256`). Re-verified LEAD prereg SHA `f22331a72e0d0ccf38b787e63acabbe9d666456ec76076787a6d545c3193425b` STILL intact (recomputed — has not moved). NEXT: STEP 2 (run RQ2-P3 confirmatory battery, offline+deterministic). +- STEP 2 DONE — RQ2-P3′ CONFIRMATORY battery RAN, OFFLINE + DETERMINISTIC (`analysis/rq2p3_confirm.py`, new harness; frozen `stats.py`/`confirm.py`/`confirm_load_rq2.py`/`assembler.py` UNCHANGED). No live docker/traffic/grid, $0 — RQ2 entropy analytic + pool bridge assignment deterministic from seed (same offline path confirm_load_rq2 uses for lead RQ2). ALL 9 §4 cells (B∈{2,4,8}×α∈{0,1,2}, B=50 anchor excluded) × R=30 × C=50 = 13,500 bridged circuits. Seeds per frozen §6: run=derive_seed(S0=20260719‖cell_id‖run_index), per-circuit=executor._circuit_seed (byte-identical to the live executor's real rule). 10,000 BCa resamples, α=0.05. +- **RESULT — RESOLVED MIX (§8 H1∧H2 agree +, both exclude 0).** H1 pooled Spearman ρ(c_i,H_i), RUN-LEVEL cluster bootstrap = **+0.6244**, 95% BCa CI **[+0.5941, +0.6545]** → mix. H2 OLS dose-response slope (per-run mean-H on per-run mean top-3 conc, 270 clustered pts) = **+0.7052**, 95% BCa CI **[+0.6195, +0.7903]** → mix. H3 joint **RESOLVED = mix**. Holm over own family {H1-pooled, H2-slope} (size 2): both reject (p_adj=0). Effect+CI reported, never bare p. +- HONEST DISCLOSURE (as commanded): the §7 dry pass already PREVIEWED this mix (ρ 0→+0.838); the battery QUANTIFIES an effect already visible at calibration; two-sided pre-commitment stood. The +ρ MIX plainly **QUALIFIES/CORRECTS the lead RQ2-P1 "shrink" headline as a unique-bridge artifact** — concentration RAISES anonymity (shared bridge = mix), opposite of the naive funnel. That correction IS the finding. Lead RQ2-P1 NOT re-litigated; pool ΔH would be EXPLORATORY (prereg §1). Both prereg SHAs intact. +- SEALED IMMUTABLY: `output/sor-rq2p3-confirmatory/rq2p3-confirmatory-results.json` (SHA-256 `5fdcb379d8a2…`) + `SHA256SUMS`; `/output/` gitignored → anchors force-added into the STEP-2 stone. Byte-identical on re-run (determinism verified). Tests: `tests/test_sor_rq2p3_confirm.py` 7 passed; full SOR suite 201 passed (no regression, frozen instruments untouched). NEXT: STEP 3 (RQ3 confirmatory — re-probe grid, launch live if up). diff --git a/cmd_chat/sor/analysis/rq2p3_confirm.py b/cmd_chat/sor/analysis/rq2p3_confirm.py new file mode 100644 index 0000000..0d15f11 --- /dev/null +++ b/cmd_chat/sor/analysis/rq2p3_confirm.py @@ -0,0 +1,365 @@ +"""RQ2-P3′ confirmatory battery — OFFLINE + DETERMINISTIC (frozen prereg +`docs/rq2p3-mechanism-prereg.md`, FROZEN 2026-07-21, SHA in the sidecar +`rq2p3-mechanism-prereg.sha256`). + +Why this can run offline. RQ2-P3′ measures **no live-only DV** — the per-circuit +anonymity-set entropy ``H_i`` is analytic (Miller–Madow over the observation- +consistent posterior) and the willing-bridge assignment is a **deterministic** +function of the circuit seed (``assembler.assemble`` under the +``bridge-federated-pool`` branch). Every circuit is recomputable from its seed with +no engine, no traffic, no grid — the SAME offline reconstruction path +``confirm_load_rq2`` uses for the lead RQ2. There is nothing to fabricate: unlike +RQ1's pcap-timing AUC or RQ3's added-latency, the RQ2-P3 DVs are not measured from a +running circuit. Containment is therefore satisfied by construction (no forwarder +ever runs); budget is $0. + +Seeds (frozen §6). Per-run seed = ``derive_seed(cell_id, run_index)`` = +``SHA256(S0=20260719 ‖ cell_id ‖ run_index)``; per-circuit seed = the confirmatory +executor's real rule ``executor._circuit_seed(run_seed, c)`` = +``SHA256("sor-circuit|{run_seed}|{c}")`` — reused verbatim so these offline circuits +are byte-identical to the ones a live executor would persist as ``per_circuit_seeds``. + +Design (frozen §4). The 9 sweep cells ``B ∈ {2,4,8} × alpha ∈ {0, 1.0, 2.0}`` at +``R = 30`` runs × ``C = 50`` circuits. The ``B=50, alpha=0`` calibration anchor from +``enumerate_rq2p3_cells()`` is NOT a confirmatory cell (§4: exactly 9) and is excluded +here. + +Analysis (frozen §8, two-sided / direction-agnostic; effect + BCa 95% CI, never a bare +p; 10,000 resamples; α = 0.05): + * **H1 (pooled Spearman ρ, run-level cluster bootstrap).** ρ between per-circuit + top-3 concentration ``c_i`` and entropy ``H_i`` over all bridged circuits, with the + **run** as the resampling unit (resample whole runs, pool their circuits) — circuits + sharing a bridge are pseudo-replicates, so per-circuit resampling would falsely + narrow the CI (§8). Funnel iff CI < 0, mix iff CI > 0, inconclusive iff it spans 0. + * **H2 (dose-response OLS slope, run-level cluster bootstrap).** Slope β of per-run + mean-H on per-run mean top-3 concentration over the 270 per-run points, resampling + whole runs. Funnel iff slope CI < 0, mix iff > 0. + * **H3 (joint).** RESOLVED iff H1 and H2 agree in sign AND both exclude 0. + * **Multiplicity.** Holm–Bonferroni over THIS study's own family {H1-pooled, + H2-slope} (family_size = 2). The lead study's family-of-7 is closed and not reopened. + +Frozen instruments reused UNCHANGED (§3): ``stats.bootstrap_ci`` (BCa), +``stats.spearman``, ``stats.holm_bonferroni``, ``confirm_load_rq2.bridge_concentration`` +/``per_circuit_entropy``/``top_k_bridge_concentration``, ``assembler.assemble``, +``executor._circuit_seed``. The only new code is this harness (seed enumeration, the +run-as-unit grouping, and an OLS-slope helper) — no detector is re-fit. + +Honest-disclosure (mandatory, §7 scope note). The §7 dry calibration pass already +PREVIEWED a mix (ρ 0→+0.838 across the sweep); this confirmatory battery **quantifies** +an effect already visible at calibration. The pre-commitment stays **two-sided**; if the +data show a mix (ρ > 0) that plainly **qualifies/corrects** the lead RQ2-P1 "shrink" +headline as a unique-bridge artifact — that correction IS the finding, reported openly. +""" + +from __future__ import annotations + +import hashlib +import json +import statistics +import sys +from dataclasses import dataclass +from pathlib import Path +from typing import Dict, List, Sequence, Tuple + +from cmd_chat.sor.analysis.confirm_load_rq2 import ( + bridge_concentration, + per_circuit_entropy, + top_k_bridge_concentration, +) +from cmd_chat.sor.analysis.stats import ( + DEFAULT_ALPHA, + DEFAULT_RESAMPLES, + bootstrap_ci, + holm_bonferroni, + spearman, + two_sided_bootstrap_p, +) +from cmd_chat.sor.assembler import assemble +from cmd_chat.sor.battery import ( + C_CIRCUITS, + R_RUNS, + S0, + derive_seed, + enumerate_rq2p3_cells, +) +from cmd_chat.sor.executor import _circuit_seed + +# A run's pooled per-circuit measurements: parallel (c_i, H_i) over its bridged +# circuits — the cluster unit for the H1 run-level bootstrap. +RunPairs = List[Tuple[float, float]] + +# A single per-run dose-response point (mean top-3 concentration, mean H) — the unit +# for the H2 slope bootstrap. +RunPoint = Tuple[float, float] + + +def confirmatory_cells(): + """The 9 frozen §4 sweep cells (B ∈ {2,4,8} × alpha ∈ {0,1,2}). The B=50 anchor + in ``enumerate_rq2p3_cells()`` is a calibration anchor (§7 gate item 1), NOT a + confirmatory cell, and is excluded.""" + return [c for c in enumerate_rq2p3_cells() if int(c.factors["pool_B"]) in (2, 4, 8)] + + +def _assemble_run(cell, run_index: int, c: int = C_CIRCUITS, + *, engine: str = "docker", hops: int = 3): + """Reconstruct one run's C circuit specs OFFLINE from the frozen seeds. Persists + nothing itself; the caller records ``per_circuit_seeds`` for the immutable seal.""" + run_seed = derive_seed(cell.cell_id, run_index) + seeds = [_circuit_seed(run_seed, c_ix) for c_ix in range(c)] + specs = [assemble(cell, s, engine=engine, hops=hops) for s in seeds] + return run_seed, seeds, specs + + +def _run_pairs(specs) -> RunPairs: + """Parallel (c_i, H_i) over the run's bridged circuits (all circuits are bridged + in the pool topology; a None-concentration circuit — none here — is dropped).""" + conc = bridge_concentration(specs) + ent = per_circuit_entropy(specs) + return [(c, h) for c, h in zip(conc, ent) if c is not None] + + +def _pooled_spearman(runs: Sequence[RunPairs]) -> float: + """Spearman ρ over the circuits of ALL runs in the (possibly resampled) cluster + sample — the run-level cluster-bootstrap statistic for H1.""" + xs: List[float] = [] + ys: List[float] = [] + for run in runs: + for c, h in run: + xs.append(c) + ys.append(h) + return spearman(xs, ys) + + +def _ols_slope(points: Sequence[RunPoint]) -> float: + """OLS slope β of y on x = cov(x,y)/var(x) over the per-run points (H2). Harness + grouping only — the frozen instruments are untouched. Zero-variance x → 0.0.""" + n = len(points) + if n < 2: + return 0.0 + mx = sum(p[0] for p in points) / n + my = sum(p[1] for p in points) / n + sxx = sum((p[0] - mx) ** 2 for p in points) + if sxx == 0.0: + return 0.0 + sxy = sum((p[0] - mx) * (p[1] - my) for p in points) + return sxy / sxx + + +@dataclass(frozen=True) +class CellRecord: + cell_id: str + B: int + alpha: float + n_runs: int + n_bridged_circuits: int + mean_top3_concentration: float + mean_entropy_bits: float + exploratory_pooled_spearman: float # EXPLORATORY per-cell ρ (§8) + + +def collect(r: int = R_RUNS, c: int = C_CIRCUITS) -> Dict: + """Reconstruct the full 9×R×C battery offline and return the immutable record: + per-cell summaries, the pooled (run-clustered) H1 pairs, the 270 H2 per-run + points, and the per-run seed provenance (for the seal).""" + cells = confirmatory_cells() + per_cell: List[CellRecord] = [] + h1_runs: List[RunPairs] = [] # one RunPairs per (cell, run) — H1 cluster units + h2_points: List[RunPoint] = [] # 9*R per-run (mean_conc, mean_H) points — H2 units + seed_manifest: List[Dict] = [] + for cell in cells: + b = int(cell.factors["pool_B"]) + alpha = float(cell.factors["pool_alpha"]) + cell_runs: List[RunPairs] = [] + cell_top3: List[float] = [] + cell_meanh: List[float] = [] + cell_bridged = 0 + for ri in range(r): + run_seed, seeds, specs = _assemble_run(cell, ri, c) + pairs = _run_pairs(specs) + cell_runs.append(pairs) + cell_bridged += len(pairs) + top3 = top_k_bridge_concentration(specs, k=3) + mean_h = statistics.fmean(h for _, h in pairs) if pairs else 0.0 + cell_top3.append(top3) + cell_meanh.append(mean_h) + h2_points.append((top3, mean_h)) + seed_manifest.append({ + "cell_id": cell.cell_id, "run_index": ri, "run_seed": run_seed, + "per_circuit_seeds": seeds, + }) + h1_runs.extend(cell_runs) + per_cell.append(CellRecord( + cell_id=cell.cell_id, B=b, alpha=alpha, n_runs=r, + n_bridged_circuits=cell_bridged, + mean_top3_concentration=statistics.fmean(cell_top3), + mean_entropy_bits=statistics.fmean(cell_meanh), + exploratory_pooled_spearman=_pooled_spearman(cell_runs), + )) + return { + "cells": per_cell, + "h1_runs": h1_runs, + "h2_points": h2_points, + "seed_manifest": seed_manifest, + "n_pooled_bridged_circuits": sum(len(run) for run in h1_runs), + } + + +def _boot_seed(tag: str) -> int: + """Deterministic bootstrap seed derived from the frozen base seed S0 so the CIs + are reproducible (the §8 seed spot-check is mechanical).""" + return int.from_bytes(hashlib.sha256(f"rq2p3-confirm|{tag}|{S0}".encode()).digest()[:8], "big") + + +def analyze(collected: Dict, *, n_resamples: int = DEFAULT_RESAMPLES, + alpha: float = DEFAULT_ALPHA) -> Dict: + """Run the frozen §8 H1/H2/H3 analysis on the collected battery. Effect + BCa + 95% CI for both; run-level cluster bootstrap; Holm over {H1-pooled, H2-slope}.""" + h1_runs: List[RunPairs] = collected["h1_runs"] + h2_points: List[RunPoint] = collected["h2_points"] + + # H1 — pooled Spearman ρ, resampling whole RUNS (cluster unit), BCa CI. + h1_ci, h1_dist = bootstrap_ci( + h1_runs, _pooled_spearman, n_resamples=n_resamples, alpha=alpha, + seed=_boot_seed("H1-pooled"), method="bca", return_dist=True, + ) + h1_p = two_sided_bootstrap_p(h1_dist, 0.0) + h1_decision = ("funnel" if h1_ci.strictly_less(0.0) + else "mix" if h1_ci.strictly_greater(0.0) + else "inconclusive") + + # H2 — OLS dose-response slope over the 270 per-run points, resampling whole RUNS. + h2_ci, h2_dist = bootstrap_ci( + h2_points, _ols_slope, n_resamples=n_resamples, alpha=alpha, + seed=_boot_seed("H2-slope"), method="bca", return_dist=True, + ) + h2_p = two_sided_bootstrap_p(h2_dist, 0.0) + h2_decision = ("funnel" if h2_ci.strictly_less(0.0) + else "mix" if h2_ci.strictly_greater(0.0) + else "inconclusive") + + # H3 — joint: RESOLVED iff H1 and H2 agree in sign AND both exclude 0. + both_exclude = h1_ci.excludes(0.0) and h2_ci.excludes(0.0) + same_sign = (h1_ci.point > 0) == (h2_ci.point > 0) + h3_resolved = bool(both_exclude and same_sign) + h3_finding = (h1_decision if h3_resolved else "unresolved") + + # Multiplicity — Holm over THIS study's own family {H1-pooled, H2-slope}, size 2. + holm = holm_bonferroni({"H1-pooled": h1_p, "H2-slope": h2_p}, + alpha=alpha, family_size=2) + + return { + "H1_pooled_spearman": { + "effect": "spearman_rho", "decision": h1_decision, + "p_for_holm": h1_p, **h1_ci.as_dict(), + }, + "H2_dose_response_slope": { + "effect": "ols_slope_H_on_conc", "decision": h2_decision, + "n_points": len(h2_points), "p_for_holm": h2_p, **h2_ci.as_dict(), + }, + "H3_joint": { + "resolved": h3_resolved, "finding": h3_finding, + "both_exclude_zero": both_exclude, "agree_in_sign": same_sign, + }, + "holm_own_family": [ + {"name": h.name, "p": h.p, "p_adjusted": h.p_adjusted, + "reject": h.reject, "rank": h.rank, "multiplier": h.multiplier} + for h in holm + ], + } + + +def run_confirmatory(r: int = R_RUNS, c: int = C_CIRCUITS, + *, n_resamples: int = DEFAULT_RESAMPLES, + alpha: float = DEFAULT_ALPHA) -> Dict: + """The full offline RQ2-P3′ confirmatory report: collect → analyze → assemble the + sealed record (with per-run seed provenance and the honest-disclosure note).""" + collected = collect(r, c) + results = analyze(collected, n_resamples=n_resamples, alpha=alpha) + cells = collected["cells"] + return { + "schema": "sor-rq2p3-confirmatory/1", + "prereg": "docs/rq2p3-mechanism-prereg.md", + "prereg_frozen": "2026-07-21", + "prereg_sha256_sidecar": "docs/rq2p3-mechanism-prereg.sha256", + "offline_deterministic": True, + "no_engine_no_traffic_no_grid": True, + "base_seed_S0": S0, + "R": r, "C": c, "n_cells": len(cells), + "n_pooled_bridged_circuits": collected["n_pooled_bridged_circuits"], + "n_resamples": n_resamples, "alpha": alpha, + "sweep": [ + {"cell_id": cr.cell_id, "B": cr.B, "alpha": cr.alpha, + "n_runs": cr.n_runs, "n_bridged_circuits": cr.n_bridged_circuits, + "mean_top3_concentration": cr.mean_top3_concentration, + "mean_entropy_bits": cr.mean_entropy_bits, + "exploratory_pooled_spearman": cr.exploratory_pooled_spearman} + for cr in cells + ], + "results": results, + "seed_manifest": collected["seed_manifest"], + "honest_disclosure": ( + "The §7 dry calibration pass already PREVIEWED a mix (rho 0->+0.838 across " + "the sweep); this confirmatory battery QUANTIFIES an effect already visible " + "at calibration. The pre-commitment stays two-sided. A mix (rho>0) qualifies/" + "corrects the lead RQ2-P1 'shrink' headline as a unique-bridge artifact — " + "that correction IS the finding, reported openly. The lead RQ2-P1 result is " + "NOT re-litigated; any pool DeltaH is EXPLORATORY (prereg §1)." + ), + } + + +def _seal(out_dir: Path, report: Dict) -> Dict[str, str]: + """Write the immutable results + a SHA256SUMS over them. ``output/`` is gitignored; + the caller force-adds the anchors so the sealed raw record enters the commit.""" + out_dir.mkdir(parents=True, exist_ok=True) + results_path = out_dir / "rq2p3-confirmatory-results.json" + results_path.write_text(json.dumps(report, indent=2, sort_keys=True), encoding="utf-8") + sums: Dict[str, str] = {} + for p in sorted(out_dir.glob("*.json")): + sums[p.name] = hashlib.sha256(p.read_bytes()).hexdigest() + sums_path = out_dir / "SHA256SUMS" + sums_path.write_text( + "".join(f"{h} {name}\n" for name, h in sorted(sums.items())), encoding="utf-8") + return {"results": str(results_path), "sha256sums": str(sums_path), **sums} + + +def main(argv=None) -> int: + import argparse + + ap = argparse.ArgumentParser( + prog="python -m cmd_chat.sor.analysis.rq2p3_confirm", + description="RQ2-P3' confirmatory battery — OFFLINE + DETERMINISTIC (frozen prereg).", + ) + ap.add_argument("--out", default="output/sor-rq2p3-confirmatory", + help="immutable seal dir (gitignored; force-add the anchors)") + ap.add_argument("--r-runs", type=int, default=R_RUNS) + ap.add_argument("--c-circuits", type=int, default=C_CIRCUITS) + ap.add_argument("--resamples", type=int, default=DEFAULT_RESAMPLES) + args = ap.parse_args(argv) + + report = run_confirmatory(args.r_runs, args.c_circuits, n_resamples=args.resamples) + sealed = _seal(Path(args.out), report) + + h1 = report["results"]["H1_pooled_spearman"] + h2 = report["results"]["H2_dose_response_slope"] + h3 = report["results"]["H3_joint"] + print(f"[RQ2-P3'] OFFLINE confirmatory — {report['n_cells']} cells x R={report['R']} " + f"x C={report['C']} = {report['n_pooled_bridged_circuits']} bridged circuits") + print(f"[H1] pooled Spearman rho = {h1['point']:+.4f} " + f"95% BCa CI [{h1['ci_lo']:+.4f}, {h1['ci_hi']:+.4f}] " + f"({h1['method']}) -> {h1['decision']}") + print(f"[H2] OLS slope H~conc = {h2['point']:+.4f} " + f"95% BCa CI [{h2['ci_lo']:+.4f}, {h2['ci_hi']:+.4f}] " + f"({h2['method']}, n={h2['n_points']}) -> {h2['decision']}") + print(f"[H3] joint -> resolved={h3['resolved']} finding={h3['finding']}") + print("[Holm own-family {H1-pooled,H2-slope}] " + ", ".join( + f"{h['name']}:p_adj={h['p_adjusted']:.4g}({'reject' if h['reject'] else 'retain'})" + for h in report["results"]["holm_own_family"])) + print(f"[seal] {sealed['results']}") + print(f"[seal] {sealed['sha256sums']}") + print("[disclosure] " + report["honest_disclosure"]) + return 0 + + +if __name__ == "__main__": + raise SystemExit(main()) diff --git a/output/sor-rq2p3-confirmatory/SHA256SUMS b/output/sor-rq2p3-confirmatory/SHA256SUMS new file mode 100644 index 0000000..e232def --- /dev/null +++ b/output/sor-rq2p3-confirmatory/SHA256SUMS @@ -0,0 +1 @@ +5fdcb379d8a2b88e766748c4907a3754cb34fc1fba56e01e1527fae7c05b872a rq2p3-confirmatory-results.json diff --git a/output/sor-rq2p3-confirmatory/rq2p3-confirmatory-results.json b/output/sor-rq2p3-confirmatory/rq2p3-confirmatory-results.json new file mode 100644 index 0000000..41670fc --- /dev/null +++ b/output/sor-rq2p3-confirmatory/rq2p3-confirmatory-results.json @@ -0,0 +1,15551 @@ +{ + "C": 50, + "R": 30, + "alpha": 0.05, + "base_seed_S0": 20260719, + "honest_disclosure": "The \u00a77 dry calibration pass already PREVIEWED a mix (rho 0->+0.838 across the sweep); this confirmatory battery QUANTIFIES an effect already visible at calibration. The pre-commitment stays two-sided. A mix (rho>0) qualifies/corrects the lead RQ2-P1 'shrink' headline as a unique-bridge artifact \u2014 that correction IS the finding, reported openly. The lead RQ2-P1 result is NOT re-litigated; any pool DeltaH is EXPLORATORY (prereg \u00a71).", + "n_cells": 9, + "n_pooled_bridged_circuits": 13500, + "n_resamples": 10000, + "no_engine_no_traffic_no_grid": true, + "offline_deterministic": true, + "prereg": "docs/rq2p3-mechanism-prereg.md", + "prereg_frozen": "2026-07-21", + "prereg_sha256_sidecar": "docs/rq2p3-mechanism-prereg.sha256", + "results": { + "H1_pooled_spearman": { + "alpha": 0.05, + "ci_hi": 0.6545126339864883, + "ci_lo": 0.594080133514097, + "decision": "mix", + "effect": "spearman_rho", + "method": "bca", + "n_resamples": 10000, + "p_for_holm": 0.0, + "point": 0.624396651211168, + "seed": 7797308243756955201 + }, + "H2_dose_response_slope": { + "alpha": 0.05, + "ci_hi": 0.7902774938128032, + "ci_lo": 0.6194549521674447, + "decision": "mix", + "effect": "ols_slope_H_on_conc", + "method": "bca", + "n_points": 270, + "n_resamples": 10000, + "p_for_holm": 0.0, + "point": 0.7052497241519052, + "seed": 12663919002302500371 + 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+ "B": 8, + "alpha": 2.0, + "cell_id": "RQ2P3/topo=bridge-federated-pool/selector=static/B=8/alpha=2.0", + "exploratory_pooled_spearman": 0.7245738197826188, + "mean_entropy_bits": 2.2849664757030586, + "mean_top3_concentration": 0.9019999999999999, + "n_bridged_circuits": 1500, + "n_runs": 30 + } + ] +} \ No newline at end of file diff --git a/tests/test_sor_rq2p3_confirm.py b/tests/test_sor_rq2p3_confirm.py new file mode 100644 index 0000000..5209226 --- /dev/null +++ b/tests/test_sor_rq2p3_confirm.py @@ -0,0 +1,96 @@ +"""RQ2-P3' confirmatory-harness pins — SYNTHETIC / OFFLINE only. + +These exercise the OFFLINE confirmatory runner's structure, seed provenance, and +determinism — NOT the substantive finding (which is the sealed record). Pins: +(a) the confirmatory cell set is exactly the 9 frozen §4 sweep cells (B∈{2,4,8}× +alpha∈{0,1,2}), the B=50 calibration anchor excluded, and stays DISJOINT from the +frozen lead lattice; (b) per-circuit seeds are the confirmatory executor's real rule +``executor._circuit_seed`` (so the offline circuits are byte-identical to what a live +executor would persist); (c) the OLS-slope helper is a real cov/var slope; (d) the +full analysis is byte-deterministic (same S0 → identical results) and well-formed — +effect + BCa CI for H1 and H2 (never a bare p), H3 joint sign/exclusion logic, and +Holm over the study's OWN family {H1-pooled, H2-slope} at family_size = 2. +""" + +import math + +from cmd_chat.sor.analysis import rq2p3_confirm as rc +from cmd_chat.sor.battery import derive_seed, enumerate_cells +from cmd_chat.sor.executor import _circuit_seed + + +# --- cell set --------------------------------------------------------------- # +def test_confirmatory_cells_are_the_nine_sweep_cells_no_anchor(): + cells = rc.confirmatory_cells() + assert len(cells) == 9 + bs = sorted(int(c.factors["pool_B"]) for c in cells) + assert bs == [2, 2, 2, 4, 4, 4, 8, 8, 8] # 3 alphas each + alphas = sorted({float(c.factors["pool_alpha"]) for c in cells}) + assert alphas == [0.0, 1.0, 2.0] + assert all(c.factors["topology"] == "bridge-federated-pool" for c in cells) + assert all(int(c.factors["pool_B"]) != 50 for c in cells) # B=50 anchor excluded + + +def test_confirmatory_cells_disjoint_from_frozen_lead_lattice(): + lead = {c.cell_id for c in enumerate_cells()} + assert lead.isdisjoint({c.cell_id for c in rc.confirmatory_cells()}) + + +# --- seed provenance matches the live executor rule ------------------------- # +def test_per_circuit_seeds_use_the_frozen_executor_rule(): + cell = rc.confirmatory_cells()[0] + run_seed, seeds, specs = rc._assemble_run(cell, 0, c=8) + assert run_seed == derive_seed(cell.cell_id, 0) + assert seeds == [_circuit_seed(run_seed, i) for i in range(8)] # byte-identical rule + assert len(specs) == 8 and all(s.bridge_present for s in specs) + + +# --- OLS slope helper ------------------------------------------------------- # +def test_ols_slope_is_cov_over_var(): + # y = 3x + 1 → slope 3 exactly; a single point / flat x → 0 (never fabricated). + pts = [(x, 3.0 * x + 1.0) for x in (0.0, 1.0, 2.0, 5.0)] + assert abs(rc._ols_slope(pts) - 3.0) < 1e-9 + assert rc._ols_slope([(1.0, 9.0)]) == 0.0 + assert rc._ols_slope([(2.0, 1.0), (2.0, 9.0)]) == 0.0 # zero-variance x + + +# --- full analysis: deterministic + well-formed ----------------------------- # +def test_run_confirmatory_deterministic_and_wellformed(): + a = rc.run_confirmatory(r=3, c=10, n_resamples=200) + b = rc.run_confirmatory(r=3, c=10, n_resamples=200) + assert a == b # same S0 → byte-identical + + assert a["offline_deterministic"] and a["no_engine_no_traffic_no_grid"] + assert a["n_cells"] == 9 and a["base_seed_S0"] == 20260719 + assert a["n_pooled_bridged_circuits"] == 9 * 3 * 10 + + h1 = a["results"]["H1_pooled_spearman"] + h2 = a["results"]["H2_dose_response_slope"] + # effect + CI present for both (never a bare p); p is only carried for Holm order. + for h in (h1, h2): + assert {"point", "ci_lo", "ci_hi", "p_for_holm"} <= set(h) + assert h["ci_lo"] <= h["point"] <= h["ci_hi"] + assert h["decision"] in ("funnel", "mix", "inconclusive") + assert h2["n_points"] == 9 * 3 # per-run dose-response points + + h3 = a["results"]["H3_joint"] + # H3 resolved iff both CIs exclude 0 AND signs agree — recompute from H1/H2. + excl = (h1["ci_lo"] > 0 or h1["ci_hi"] < 0) and (h2["ci_lo"] > 0 or h2["ci_hi"] < 0) + same = (h1["point"] > 0) == (h2["point"] > 0) + assert h3["resolved"] == bool(excl and same) + + +def test_holm_is_over_own_family_of_two(): + a = rc.run_confirmatory(r=3, c=10, n_resamples=200) + holm = a["results"]["holm_own_family"] + assert {h["name"] for h in holm} == {"H1-pooled", "H2-slope"} + # family_size = 2 → the smallest-p test gets multiplier 2, the next gets 1. + assert sorted(h["multiplier"] for h in holm) == [1, 2] + + +def test_disclosure_and_freeze_provenance_present(): + a = rc.run_confirmatory(r=2, c=6, n_resamples=50) + assert a["prereg_frozen"] == "2026-07-21" + assert a["prereg_sha256_sidecar"] == "docs/rq2p3-mechanism-prereg.sha256" + assert "two-sided" in a["honest_disclosure"] + assert "unique-bridge artifact" in a["honest_disclosure"]